A Multi-level Approach to Biologically Inspired Robotic Systems1
Instituto Tecnológico Autónomo de México (ITAM) Río Hondo #1, San Angel Tizapán, CP 01000 Abstract
The study of biological systems has inspired the development of a large number of neural networkarchitectures and robotic implementations. Through both experimentation and simulation biologicalsystems provides a means to understand the underlying mechanisms in living organisms while inspiring thedevelopment of robotic applications. Experimentation, in the form of data gathering (ethologicalphysiological and anatomical), provides the underlying data for simulation generating predictions to bevalidated by theoretical models. These models provide the understanding for the underlying neuraldynamics, and serve as basis for simulation and robotic experimentation. Due to the inherent complexity ofthese systems, a multi-level analysis approach is required where biological, theoretic and robotic systemsare studied at different levels of granularity. The work presented here overviews our existing modelingapproach and describes current simulation results.
The study of biological systems comprises a cycle of biological experimentation, computational modeling androbotics experimentation, as depicted in Figure 1. This cycle serves as framework for the study of the underlyingneural mechanisms responsible for behavior in animals and serving as inspiration in designing robotic systems.
Figure 1. Framework for the study of living organisms through cycles of biological experimentation,computational modeling, and robotics experimentation.
To address the underlying complexity in building biologically inspired robotic systems we have developed a multi-level analysis approach integrating across different modeling and simulation levels studied primarily with respect tofour different ones: (1) autonomous robotic agents, (2) behavior, (3) neural networks, and (4) detailed neurons.
1. At the highest level, autonomous robotic agents are designed to interact with the world via sensors and actuators. These agents are simulated in virtual autonomous agents and implemented in real robots.
Autonomous robotic agents are exemplified by biologically inspired systems, such as the computational frog(rana computatrix) [1], the computational praying mantis [5], the computational cockroach [6], and thecomputational hoverfly [11].
1 We thank the NSF-CONACyT collaboration grant (#IRI-9522999 in the US and #546500-5-C018-A in Mexico),the CONACyT REDII grant in Mexico, as well as the "Asociación Mexicana de Cultura, A.C.".
2. At the behavior level, neuroethological data from living animals is gathered to generate single and multi-agent systems to study the relationship between an agent and its environment, giving emphasis to aspects such ascooperation and competition between agents. We describe agent behavior in terms of perceptual and motorschemas [3] decomposed and refined in a recursive fashion. Behaviors, and their corresponding schemas, aresimulated via the Abstract Simulation Language ASL [22]. Examples of behavioral models include the prayingmantis Chantlitlaxia ("search for a proper habitat") [9] and the frog and toad prey acquisition and predatoravoidance models [12].
3. At the neural network level, neuroanatomical and neuronphysiological data are used to generate perceptual and motor neural network models corresponding to schemas developed at the behavioral level. These models try toexplain the underlying mechanisms for sensorimotor integration. Neural networks are simulated via the NeuralSimulation Language NSL [24][25]. Neural network models are exemplified by the prey acquisition andpredator avoidance neural models [10] and the toad prey acquisition with detour behavior model involvingadaptation and learning [13].
4. At the detailed neural level, electrochemical neural mechanisms are studied to understand different neural phenomena such as synaptic plasticity and presynaptic inhibition. A number of models are used depending ofthe mechanisms simulated, such as the compartmental model, where a single axon is divided in compartments[19], and the ion kinetics model, where chemical concentration responsible for electric current is simulated [18].
These models are simulated with systems such as GENESIS [7] and NEURON [17].
2 Modeling Levels
In the following sections we overview the different modeling levels using as an example rana computatrix [Arbib1987] behaviors inspired on biological studies of frogs and its application to different robotic experiments.
2.1 Autonomous Robotic Agents
Autonomous robotic agents can be either simulated in a virtual world or executed in the real world. In particular,frogs (and toads) and the corresponding rana computatrix use vision and tact as their primary sensors with legs andtongue as their primary actuators, both virtual and real. In Figure 2 we show an illustration of a frog in a setupinvolving a prey (worm) interposed by a fencepost.
Figure 2. Computational frog in a prey and barrier setup.
2.2 Behaviors
Behaviors are described by ethograms, as the one shown in Figure 3 defining rana computatrix behaviors.
Figure 3. Rana Computatrix ethogram: Mating, Prey Acquisition and Predator Avoidance schemas(moving and non-moving objects) [8]. The diagram shows feedback between perceptual schemas(triangles) and regular schemas (rectangles). Note the hierarchical schema organization. (Acronyms are asfollows: PS - Perceptual Schema, MO - Moving Object, NMO - Non-Moving Object, S -Schemas) In Figure 4 we show in more detail a typical prey acquisition behavior for the frog.
Mobile visual stimulus in lateral visual field(monocular perception) Mobile visual stimulus in binocular visual field(short distance) Mechanic stimulusin mouth and pharynxreceptors Figure 4. Frog's prey acquisition behavior involving a worm as shown on the left-hand side. The right-handside describes the frog's response in relation to the stimulus [16].
The particular behavior we will describe in more detail is the frog's prey acquisition with detour as introducedpreviously in Figure 2. The setup involves a frog and a barrier in front of a prey, where fencepost gaps have thesame width, with the following experiments carried out [13] and shown in Figure 5.
Figure 5. A. Approach to prey with single 10cm barrier with immediate detour. B. Approach to prey with
single 20 cm barrier: first trial with frog in front of 20cm barrier (numbers indicate the succession of the
movements). The toad directly approaches de center of the barrier requiring successive trials to manage the
detour around it. C. Approach to prey with single 20cm barrier. After 3 trials the frog detours directly
around the 20cm barrier. Arrowheads indicate the position and orientation of the frog following a single
continuous movement after which the frog pauses.
Experiment I: Barrier 10cm Wide. Frogs that started from a long enough distance (15-25cm) in front of a 10cm
wide barrier (and with the worm 10cm behind the barrier) showed (in 95% of the trials) reliable detourbehaviors from the first interaction with the 10cm barrier. They produced an immediate approach movementtowards one of the edges of the barrier.
Experiment II: Barrier 20 cm wide. The "naïve" frog (a frog that has not been yet exposed to the barrier) tends
to go for a fencepost gap in the direction of the prey (this was the case for 88% of the trials). The frog starts outapproaching the fence trying to make its way through the gaps. During the first trials the frog goes straighttowards the prey thus bumping into the barrier. Since the frog is not able to go through a gap it backs-up about2cm and then reorients towards one of the neighboring gaps. After 2 (43%) or 3 (57%) trials, the "trained" frogis already detouring around the barrier without bumping into the barrier. The behavior involves a synergy ofboth forward and lateral body (sidestep) movements in a very smooth and continuous single movement.
In order to model such behaviors we introduce the schema computational model. Schemas define a hierarchicaldistributed model for action-perception control, where each schema incorporates its own structure and controlmechanisms. At the higher abstraction levels, the detailed schema implementation is left unspecified, onlyspecifying what is to be achieved. At a lower level, schemas are implemented with neural networks or otherprocesses. The schema computational model follows a tree-like structure as shown in Figure 6 (schemas may also beshared making the structure a directed graph). At the top, a high level schema is decomposed into two lower levelschemas where the three schemas together are known as schema aggregates, or assemblages. When at the samelevel, schemas are interconnected (solid arrows), or when at different levels, schemas are relabeled having their taskdelegated (dashed arrows).
Figure 6. The ASL/NSL computational model is based on hierarchical interconnected schemas. A schemaat a higher level (level 1) is decomposed (dashed lines) into additional interconnected (solid arrow)subschemas (level 2). At the lowest level schemas are implemented by neural networks or other processes.
The schema interface consists of multiple unidirectional control/data, input and output ports having a body whereschema behavior is specified, as shown in Figure 7. Communication is in the form of asynchronous messagepassing, hierarchically managed, internally, through anonymous port reading and writing, and externally, throughdynamic port connections and relabelings.
Figure 7. Each schema may contain multiple input, din1,.,dinn, and output, dout1,.,doutm, ports forunidirectional communication.
When doing connections, output ports from one schema are connected to input ports from other schemas, and whendoing relabelings, ports of similar type (input or output) belonging to schemas at different levels in the hierarchy are linked to each other. The hierarchical port management methodology enables the development of distributedarchitectures where schemas may be designed in a top-down and bottom-up fashion implemented independently andwithout prior knowledge of the complete model or their final execution environment, encouraging componentreusability.
Figure 8 shows the schema model hierarchy corresponding to the toad's prey acquisitions with detour model [14].
We show a single schema level (level 1) describing the different behaviors being modeled, primarily prey approachand static object avoid. Additional schemas include visual and tactile input, moving stimulus selector (when morethan one prey exists), prey and static object recognizers together with the four types of motor actions: forward,orient, sidestep and backward. Tasks at this level are delegated to the next level down, the neural level, whereschemas perform more refined tasks. In this model, both the prey approach and the static object avoid schemas areimplemented by neural schemas: a Retina [21], Maximum Selector [15], Tectum and PreTectum-Thalamus [8],together with neural motor heading maps.
Schema Level
Neural Level
Figure 8. Schema model hierarchy for the toad's prey acquisition and static object avoidance modelpreviously described.
Complexity is much more significant when considering more behaviors and other brain regions [4].
2.3 Neural Networks
Biologically inspired neural networks are based on physiological and anatomical neural mappings. For example,Figure 9 shows a diagram of different neural areas involved in the frog's prey acquisition and detour model.
Figure 9. The two illustrations show the most important areas in the frog's prey acquisition model. Theseare the Optic Tectum (O) (divided in four regions: Temporal (T), Dorsal (D), Nasal (N) and Ventral (V)),the Thalamic Pretectal Neuropil (P), together with other regions: Nucleus of Belonci (B), LateralGeniculate Nucleus (C) and Basal Optic Root (X) [20].
Neural schemas provide their implementation in terms of neural networks processing, as shown in Figure 10.
Figure 10. Neural schema hierarchy showing task delegation to neural networks processing.
At this level, neural networks are simple processing units interconnected among each other to provide large-scalecomputation. Each neuron is defined by its membrane potential value m depending on its previous history andcurrent input sm while its output value M is defined by a non-linear threshold function over its membrane potential,as shown in Figure 11. For example, the leaky integrator model [2] is used to simulate such neurons.
Figure 11. Simple neural element as basic component at the neural network level.
For example, at this level of granularity the MaxSelector [15] neural schema is implemented by the neural networkshown in Figure 12.
Figure 12. The neural network shown corresponds to the architecture of the Maximum Selector model,where ui and v represent neural membrane potentials, Ui and V represent neural firing rates, Si representinputs to the network, and wi represent connection weights. The network is initialized with a number ofpositive inputs assigned to different cells. After many iterations the network stabilizes producing a single"winner", i.e. a single active cell.
The neural schema model also provides an extended model where neurons themselves may have their task delegatedby neural implementations of different levels of detail, from the very simple neuron models to very detailed ones[23].
2.4 Neurons
Neuron models vary in their detail, depending on the particular simulated mechanisms, involving at the top level ofa soma (nucleus of the neuron), an axon (output of the neuron), and dendrites (input to the neuron). Connectionsbetween neurons take place in the synapses at the axon terminals of one neuron connected to the dendrites of anotherneuron. Synapses are the main mechanism for plasticity in neurons and can be further refined into much more detail,as shown in Figure 13.
Figure 13. Neural modeling at different levels of details.
3 Simulation Results
Due to space limitations in this paper we only show the resulting path motion seen at the top level for the previousbasic experiments, as shown in Figure 14. Additional graphs (not shown here) display neural network states for thedifferent neural schemas.
Figure 14. The above diagrams display the Rana Computatrix basic experiments for the prey acquisitionand detour model. The different dots correspond to the frog's trajectory from its initial location as it finallyreaches the prey. The left-hand side shows the resulting motion path for the 10cm barrier. Note how thefrog heads directly towards the side of the barrier. The middle diagram displays the resulting motion pathfor the 20cm barrier experiment before learning. We have added numbers corresponding to the frog'sposition in time. In this particular experiment the frog hits the barrier three times before perceiving the sideof the barrier and moving towards the prey. The right-hand side diagram shows the resulting motion pathfor the 20cm wide barrier after learning.
4 Discussion
The work presented here overviews the inherent complexity in modeling biological systems. This complexity can bemanaged by taking a multi-level approach emphasizing both top-town and bottom-up designs through differentgranularity levels. At the top level agents are defined in terms of sensors and actuators and may involve interactionwith other agents, such as in competition and cooperation. Next level down, each agent is described in terms of itsbehaviors such as in the frog's prey acquisitions with detour model. Once basic behaviors are defined additional onesmay be added taking advantage of the underlying schema architecture. Next level down, behaviors are implementedby different (or common) neural schemas representing neural network processing. The detailed neuron bottom levelis required only when simple neural models do not provide sufficient processing capabilities such as those requiringsynaptic plasticity or presynaptic inhibition. Current work involves experimentation with these and other models andapplying them to robots to provide the feedback in experimentation as described in Figure 1.
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